Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKEKFGIGKAHSKIILMGEHSVVYGYPAIAIPLKNIEVTCLIEEAPQLIALDMTD--PLSTAIFA------------ALDYL--GKTSSKIAYHIESQVPERRGMGSSAAVAIAAIRAVFDYFDEDLEADLLECLVNRAEMIAHSNPSGLDAKTCLSENTIKFIRNIG---FSTVPMHLNAYLVIADTGIHGHTKEAVDKVKSSGEAVLPFLKEL----GYLAEASEDAIHKSDSKQLGSLMTKAHQSLKQLGVSSLEADHLVEVAISCGALGAKMSGGGLGGCIIALV--KEKREAERLSQQLEREGAVNTWTEKV |
| 2HFU Chain:A ((18-304)) | ---------GYGKVILFGEHFVVHGAEAIVAGISEY-TECRLEINPGVPGLQVDDQRPAIPGYIAQKRDEQIKAHQLVLDHLKVDLSGDGLKMFIGGPLVPSSGIGASASDVVAFSRALSELYQLNLTDEEVNLSAFVGEGGYHGTPSGADNTAATYGGLILYRRQNGKSVFKPIAFQQRLYLVVVGTGINASTAKVVNDVHKMKQQQPVQFKRLYDNYTHIVSQAREALQKGDLQRLGQLMNANHDLCRQIDVSCRELESIVQTCRTYGALGAKLSGTGRGGIAVALAASSDQRDAIVKGLKAKCPEAKFIWRYTV |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HFU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -150152 for 2174 contacts (-69.1/contact) +
2D Compatibility (PS) -28251 + (NN) -7986 + (LL) 600
1D Compatibility (HY) -11200 + (ID) 3950
Total energy: -200939.0 ( -92.43 by residue)
QMean score : 0.386
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