Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKATFTRNQSGYLYSAEISGHAGSGEYGFDVICAAVSTLSINFINSLEALTTCQAQLIINDVEGGYMKIDLSSIPQHKEDKVQLLFESYLLGMTNLSKDSSEFVSTIVMTH
4PEO Chain:A ((1-101))
MITVDITVNDEGKVTDVIMDG-------------AGASAVLFGSVNAIIGLTSERPDINYDD-NGGHFHI--RSVDTNN-DEAQLILQTMLVSLQTIEEEYN-NIRLNYK--
General information:
TITO was launched using:
RESULT:
Template:
4PEO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53253 for 591 contacts (-90.1/contact) +
2D Compatibility (PS) -9083 + (NN) -2519 + (LL) 872
1D Compatibility (HY) -6000 + (ID) 1000
Total energy: -70983.0 ( -120.11 by residue)
QMean score : 0.519
(partial model without unconserved sides chains):
PDB file :
Tito_4PEO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4PEO-query.scw
PDB file :
Tito_Scwrl_4PEO.pdb
: