Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLSRQNSKLIQAFIAIILFFSLGLVIKYWPDTVIAFDQNIQESVRGQLPNLSTRFFKLITVIGNTVSQIAIAIMSVTFCYLKKWYPQARFIAVNAIISGICILSLKLIFQRVRPTLTH--------------------------LVFAGGYSFPSGHSMGTFMIFGSIIILLQYYMPK------S--I-----------------------------------WKLLCQGILGLLIFLIGLSRIYLGVHFPTDVLAGFILAYGILNLTAYIFLAKDWLKKVK |
| 3BB0 Chain:A ((336-513)) | ----------------------------------------------------------------------------------------ALVDVACTDAGIFSWKEKWEFEFWRPLSGVRDDGRPDHGDPFWLTLGAPATNTNDIPFKPPFPAYPSGHATFGGAVFQMVRRYYNGRVGTWKDDEPDNIAIDMMISEELNGVNRDLRQPYDPTAPIEDQPGIVRTRIVRHFDSAWELMFENAISRIFLGVHWRFDAAAARDILIPTTTKDVYAVDNNGATVFQN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BB0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -64520 for 693 contacts (-93.1/contact) +
2D Compatibility (PS) -10755 + (NN) 3543 + (LL) 8252
1D Compatibility (HY) 800 + (ID) 1150
Total energy: -63830.0 ( -92.11 by residue)
QMean score : 0.118
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