Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKINKCLTVFSTLLLILTSLFSVAPAFADDVTTDTVTLHKIVMPQAAFDNFTEGTKGKNDSDYVGKQINDLKSYFGSTDAKEIKGAFFVFKNETGTKFITENGKEVDTLEAKDAEGGAVLSGLTKDTGFAFNTAKLKGTYQIVELKEKSNYDNNGSILADSKAVPVKITLPLVNNQGVVKDAHIYPKNTETKPQVDKNFADKDLDYTDNRKDKGVVSATVGDKKEYIVGTKILKGSDYKKLVWTDSMTKGLTFN-NNVKVTLDGKDFPVLNYKLVTDDQGFRLALNATGLAAVAAAAKDKDVE--IKITYSATVNGSTTVEVPETNDVKLDYGNNPTEESEPQEGTP-ANQEIKVIKDWAVDGTITDVNVAVKAIFTLQEKQTDGTWVNVASHEATKPSRFEHTFTGLDNTKTYRVVER-VSGYTPEYVSFKN-GVVTIKNNKNSNDPTPINPSEPKVVTYGRKFVKTNQANTERLAGATFLV---KKEGKYLARKAGAATAEAKAAVKTAKLALDEAVKAYNDLTKEKQEGQEGKTALATVDQKQKAYNDAFVKANYSYEWVADKKADNVVKLISNAGGQFEITGLDKGTYSLEETQAPAGYATLSGDVNFEVTATSYSKGATTDIAYDKGSVKKDAQQVQNKKVTIPQTGGIGTILFTIIGLSIMLGAVVVMKKRQSEEA |
| 2X9Y Chain:A ((187-625)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AKPKIDKDFKGKANPDTPRVDKDTPVNHQVGDVVEYEIVTKIPALANYATANWSDRMTEGLAFNKGTVKVTVDDVALEAGDYALTEVATGFDLKLTDAGLAKV----NDQNAEKTVKITYSATLNDKAIVEVPESNDVTFNYGNNPDHGNTPKPNKPNENGDLTLTKTW-VDATGAPIPAGAEATFDLVNAQA-GKVVQTVTLTTDKNTV---TVNGLDKNTEYKFVERSIKGYSADYQEITTAGEIAVKNWKDEN-PKPLDPTEPKVVTYGKKFVKVNDKDN-RLAGAEFVIANADNAGQYLARKADKVSQEEKQLVVTTKDALDRAVAAYNALTAQQQT----QQEKEKVDKAQAAYNAAVIAANNAFEWVADKDNENVVKLVSDAQGRFEITGLLAGTYYLEETKQPAGYALLTSRQKFEVTATSYS-ATGQGIEYTAGSGKDDATKVVNKK------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2X9Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 92683 for 3460 contacts (26.8/contact) +
2D Compatibility (PS) -46733 + (NN) -16040 + (LL) 15120
1D Compatibility (HY) -27600 + (ID) 10050
Total energy: 7380.0 ( 2.13 by residue)
QMean score : 0.430
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