Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLAVLGTGMIVKEVLPVLQKIEGIDLVAILSTVRSLETAKDLAKEYNMSLATSEYKAVLDNEEIDTVYIGLPNHLHFDYAKEALLAGKHVICEKPFTLEASQLEELVSIANTRQLILLEAITNQYLPNFDLVKEHLSN--LGDIKIVECNYSQYSSRYDAFKRGEIAPAFNPEMGGGALRDLNIYNLHLVIGLFG----EPITAQYLPNIERGIDTSGVLVLDY-GHFKTVCIGAKDCSAEVK----STIQGDKGSIAILGPTNTMPKISLTMNGQESHVYQLNGDRHRMHDEFVIFEGIISNLDFKRAAQALEHSRTVMKVLDMVTK |
| 2O4U Chain:X ((3-252)) | LRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKHDIPKAYGSYEELAKDPNVEVAYVGTQHPQHKAAVMLCLAAGKAVLCEKPMGVNAAEVREMVTEARSRGLFLMEAIWTRFFPASEALRSVLAQGTLGDLRVARAEFGKNLT--------HVPRAVDWAQAGGALLDLGIYCVQFISMVFGGQKPEKISVMGRRH-ETGVDDTVTVLLQYPGEVH----GSFTCSITAQLSNTASVSGTKGMAQLLNPCWCPTELVVKGEHKEFLLPPVPKNCNFDNGAGMSYEAKHVRECLRKGLKESPVIPLVESELLADIL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2O4U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -135451 for 1885 contacts (-71.9/contact) +
2D Compatibility (PS) -25798 + (NN) -9656 + (LL) 1092
1D Compatibility (HY) -13600 + (ID) 3300
Total energy: -186713.0 ( -99.05 by residue)
QMean score : 0.471
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