Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAIRKLVVMSDSHGDRDIVKDIKNHYLGKVDAIFHNGDSELPSSDPIWEGIHVVTGNCDYDSGYPEVLVTKIDNTVIVQTHGHLHQINFTWD---KLDLLAQQEDADICLYGHLHRADAWKNGKTIFINPGSVLQPRGPINEKLYAVVTITDSKVLVEYYTRQHQPYPNLTKEFSR
3PSN Chain:A ((66-144))
--------------------------------------------------VHIVRGDFDENLNYPEQKVVTVGQFKIGLIHGH--QV-IPWGDMASLALLQRQFDVDILISGHTHKFEAFEHENKFYINPGSATGAYNALETNIIPSFVLMDIQASTVVTYVYQLIGDDVKVERIE
General information:
TITO was launched using:
RESULT:
Template:
3PSN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19600 for 439 contacts (-44.6/contact) +
2D Compatibility (PS) -8783 + (NN) -8794 + (LL) 2536
1D Compatibility (HY) -5600 + (ID) 1500
Total energy: -41741.0 ( -95.08 by residue)
QMean score : 0.515
(partial model without unconserved sides chains):
PDB file :
Tito_3PSN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3PSN-query.scw
PDB file :
Tito_Scwrl_3PSN.pdb
: