Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLKHIVLGLALTTLLGVTFSNQEVSASSTSSKVVKVGVMTFSDTEKARWDKIEKLVG-DKAKIKFTEFTDYTQPNQATANKDVDINAFQHYNFLENWNKENKKNLI-PLEKTYLAPIRIYSEKVKSLKKLKKGATIAIPNDATNGSRALYVLQSAGLIKLNVSGKKVATVANITSNKKDINIQELDASQTPRALKDVDAAIINNTYIEQANLKP-SDAIFVEKSDKNS-KQWINIIAGRKNWKKQKNAKAIQAILDAYHTDEVKKVIKDTSADIPQW |
| 1P99 Chain:A ((40-274)) | ---------------------------------KVTIGVAS-NDTK--AWEKVKELAKKDDIDVEIKHFSDYNLPNKALNDGDIDMNAFQHFAFLDQYKKAHKGTKISALSTTVLAPLGIYSDKIKDVKKVKDGAKVVIPNDVSNQARALKLLEAAGLIKLKKDFGLAGTVKDITSNPKHLKITAVDAQQTARALSDVDIAVINNGVATKAGKDPKNDPIFLEKSNSDAVKPYINIVAVN---DKDLDNKTYAKIVELYHSKEAQKALQEDVKDGEKP |
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General information:
TITO was launched using:
| RESULT:
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Template: 1P99.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -55752 for 1899 contacts (-29.4/contact) +
2D Compatibility (PS) -24131 + (NN) -5121 + (LL) 3020
1D Compatibility (HY) -18400 + (ID) 5000
Total energy: -105384.0 ( -55.49 by residue)
QMean score : 0.459
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