Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGRKWANIVAKKTAKDGANSKVYAKFGVEIYVAAKQGEPDPESNSALKFVLDRAKQAQVPKHVIDKAIDKA---KGNTDETFVEGRYEGFGPNGSMIIVDTLTSNVNRTAANVRTAYGK-NGGNMGASGSVSYLFDKKGVIVFAGDDADTV---FEQLLEADVD--VDDVEAEEGTITV---YTAPTDLHKGIQALRDNGVEEFQVTELEMIPQSEVVLEGDDLETFEKLIDALESDDDVQKVYHNVADF
1MW7 Chain:A ((21-239))
--------------------KVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMPKDNIDAAIKRASSKEGNLSEI----TYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVPNGSLEFMFNRKSVFECLKNEVENLKLSLEDLEFALIDYGLEELEEVEDKIIIRGDYNSFKLLNEGFESLKLPILK----ASLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVALYTNIE--
General information:
TITO was launched using:
RESULT:
Template:
1MW7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31319 for 1499 contacts (-20.9/contact) +
2D Compatibility (PS) -22697 + (NN) -11155 + (LL) 2008
1D Compatibility (HY) -15600 + (ID) 3400
Total energy: -82163.0 ( -54.81 by residue)
QMean score : 0.437
(partial model without unconserved sides chains):
PDB file :
Tito_1MW7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MW7-query.scw
PDB file :
Tito_Scwrl_1MW7.pdb
: