Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKTVKEISHISGISVRTLHYYDEIDLLPPSFVGENGYRYYDDESLIKLQEILLFKELEFPLKKIKEIMDSPNYDRNQALLDQIRWLEL---KKQRLEEVIEHAKSIQRGKNMSDFTAYNQEELEAFQEEARTRWGDTDSYKEFENSYSKNDFSMISQAMSQIFKDFGQLKELSPTDEKVQKQVQILQDYITAQFYNCTNDLLASLGIMYIQDERFQRSIDNWGGQGTALFVSKAIDSYCQ |
2VZ4 Chain:A ((3-103)) | --SVGQVAGFAGVTVRTLHHYDDIGLLVPSERSHAGHRRYSDADLDRLQQILFYRELGFPLDEVAALLDD-----RAHLRRQHELLSARIGKLQKMAAAVEQAME--------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VZ4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -33906 for 541 contacts (-62.7/contact) +
2D Compatibility (PS) -10447 + (NN) -8303 + (LL) 9228
1D Compatibility (HY) -7200 + (ID) 1800
Total energy: -52428.0 ( -96.91 by residue)
QMean score : 0.607
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