Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEELFCIGCGARIQTENKDAAGYTPRAALEKGLETGELYCQRCFRLRHYNEITDVHITDDEFLKLLHEVGDSDALVVNVIDIFDFNGSIIPGLSRFVAGNDVLLVGNKKDILPKSVKDGKVTQWLTERAHEEGLRPVDVILTSAQNHHAIKDLIDTIEKYRHGRDVYVVGVTNVGKSTLINAIIREITGSRDVITTSRFPGTTLDKIEIPLDDGSYIFDTPGIIHRHQMAHYLTAKNLKYVS-PKKEIKPKTYQLNSEQTLFLAGLARFDFISGQKQGFTAYFDNNLNLHRTKLVGADEFYTKHVGKLLTPPTGKEVSDFPKLVRHEFTIKNKMDIVYSGLGWIRVKSEAENPVVVAAWAPEGVAVVLRKALI |
| 3CNN Chain:A ((47-208)) | ---------------------------------------------------------------------------------------------------KETIILLNKVDI-----ADEKTTKKWVEFFKKQGKR-----VITTHKGEPRKVLLKKLSFDRLAR-VLIVGVPNTGKSTIIN----KLKGKRA------------GIQWFSLENGVKILDTPGILYKNIFSEDLAAKLLLVGSLPVERIE--------DQRIFERAFEIFARSIGIESSFSEFFEDFARKRGLLKKGGVPDIERALMLFFTEVAQGKAGRVSFERPED---------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3CNN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -23677 for 919 contacts (-25.8/contact) +
2D Compatibility (PS) -16352 + (NN) -7328 + (LL) 11384
1D Compatibility (HY) -8400 + (ID) 2400
Total energy: -46773.0 ( -50.90 by residue)
QMean score : 0.303
|
|
|