Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNLPTEIRYRPYDEWTEEDKENIVKNVSKSPWRATYHLEAKTGLLNDPNGFSYFNGKFHLFYQNWPFGAAHGLKQWVHTESDDLVHFKETGIKLKPDHVNDSHGAYSGSALAIDDK--LFLFYTGNVRDMKW-NRDPRQIGAW---MTS---DGKITKFDK--VLISQPND-VTEHFRDPQIFNYDNQFYAVIGAQNSKKCGFIKLYKALNNDIHHWEFVGDLDFGGTGSEYMIECPNIIFVKGKP-----VLLYSPQGLDKNELDYQNIYPNTYKIGQYFDANSSKIVEPSPIYNL-DYGFEAYATQGFNTSDGRAFIVSWIGLPDIDYPSDQFDYQGAMSLVKELSI-KNGNLYQYPVPAMKNLRQHQAEFKT--------QLQTNNTYELE------LLVPRNDLSSFVLFANPKGQGLSITIDTAKGKVIVDR-SQAGQQYATEFGTSRQCNIPKDATSVNVFIDKSIFEIFINKGEKVFTGRVFPDAEQSGIQLKEGHVHGKYFELKY |
| 3PIJ Chain:A ((39-495)) | -------------------------------WYPKYHIASNGGWINDPNGLCFYKGRWHVFYQLHPYGTQWGPMHWGHVSSTDMLNWKREPIMFAPSLEQEKDGVFSGSAV-IDDNGDLRFYYTGH----RWANGHDNTGGDWQVQMTALPDNDELTSATKQGMIIDCPTDKVDHHYRDPKVWKTGDTWYMTFGVSSADKRGQMWLFSS--KDMVRWEYERVLFQHPDPDVFMLECPDFSPIKDKDGNEKWVIGFSAMGSKPSGFMNRNVSNAGYMIGTWEPGGEFK---PETEFRLWDCGHNYYAPQSFNV-DGRQIVYGWMSPFVQPIPMEDDGWCGQLTLPREITLGDDGDVVTAPVAEMEGLREDTLDHGSVTLDMDGEQIIADDAEAVEIEMTIDLAASTAERAGLKIHATEDGAYTYVAYDGQIGRVVVDRQAMANGDRGYRAAPLTDAELASGKLDLRVFVDRGSVEVYVNGGHQVLSSYSYASEGPRAIKLVAESGSLKVDSLKL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PIJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -88367 for 3510 contacts (-25.2/contact) +
2D Compatibility (PS) -45639 + (NN) -17786 + (LL) 2800
1D Compatibility (HY) -26400 + (ID) 5950
Total energy: -181342.0 ( -51.66 by residue)
QMean score : 0.391
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