Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNTIVMQADKKLQEKIRTDLAQHHISNNNPY-VVFSAKISGTTVLLYTSGKLVFQGSNASHIAQKYGYIEQKESCSSETQD-------------IPIIGTDEVGNGSYFGGLAVVASFVTPKDHAYLKKLGVGDSKTLTDQKIKQIAPLLEKAIPHKALLLSPQKYN--QVVG-PNNKHNAVSVKVALHNQAIFLLLQDGF---EPEKIVIDAFTSSKNYQNYLKNEKNQFKQTITLEEKAENKYLAVAVSSIIARNLFLENLNKLSDDVGYKLPSGAGHQSDKVASQLLKAYGISSLEHCAKLHFANTKKAQALLK |
| 3ASM Chain:A ((2-307)) | -SNYVIQADQQLLDALRAHY-EGALSDRLPAGALFAVKRPDVVITAYRSGKVLFAGKAAEQEAAKW---ISGASASNETADHQPSALAAHQLGSLSAIGSDEVGTGDYFGPIVVAAAYVDRPHIAKIAALGVKDSKQLNDEAIKRIAPAIMETVPHAVTVLDNPQYNRWQRSGMPQTKMKAL-----LHNRTLVKLV-DAIAPAEPEAIIIDEFLKRDSYFRYLSDEDRIIRERVHCLPKAESVHVSVAAASIIARYVFLEEMEQLSRAVGLLLPKGAGAIVDEAAARIIRARGEEMLETCAKLHFANTKKALAIAK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ASM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -123487 for 2289 contacts (-53.9/contact) +
2D Compatibility (PS) -31141 + (NN) -13711 + (LL) 1160
1D Compatibility (HY) -20000 + (ID) 5950
Total energy: -193129.0 ( -84.37 by residue)
QMean score : 0.593
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