Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLVIILIIVLASLTVTIISYQKMTELTKSVEKQLEDNADNLSDQLTYQIEAAQKDQILTLTN-QLNRMQQEIY--QLLTDMRTELNQHLTE-SRDRSDKRLELINSNLSQSVQKMQDSNEKRLDQMRQTVEEKLEKTLQTRLQTSFETVSRQLESVNQGLGEMKTVAQDVGTLNKVLSNTKTRGILGELQLGQIIEDIMTVSQYEREFPTVSGSSERVEYAIKLPGNGQGDYIYLPIDSKFPLEDYYRLEDAYELGDKVQIELYRKSLLASIRKFAKDINNKYLNPPETTNFGIMFLPTEGLYSEVVRNATFFDSLRRDENIVVAGPSTLSALLNSLSVGFKTLNIQKNANDISKILGNVKVEFGKFGGMLSKAQKQLNTASKSIDNLLTTRTNAIIRALNTVEEHQDQATTSLLNLPITEEEEINEN |
4DVZ Chain:A ((622-756)) | ------------------SLRKREHLEKEVEKKLESKSGNK-----KAQANSQKDEIFALINKEANRDARAIAYTQNLKGIKRELSDKLEKISKDLKD---------FSKSFDEFKN-----FSKAEETL--KALKGSVKDLGINPEWISK-VENLNAALNEFKN----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DVZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 17825 for 595 contacts (30.0/contact) +
2D Compatibility (PS) -13215 + (NN) -5250 + (LL) 21040
1D Compatibility (HY) -4400 + (ID) 2000
Total energy: 14000.0 ( 23.53 by residue)
QMean score : 0.280
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