Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKKSLISNLILINSITLFLGFYLIYFSVNYVIKDYVHQMTRNSMQANFTILDSIYNNKKIPDENMVNQDSIFVWSYYAIFDQHYRMKYGTDNHKKESHDIIRYLTQKRLWQISKEKDGMFVTIKKKTYYVMTKDYSGILVDGSIKKVPKAQSQLFHVINFSDITYTQHLITKINHFLIVILVLTYIPMLFIMRKTFTGIRESIQSVQTYISSLWKNQGNHQSSQKEIVFSDFDPLLLESQEMANRIYQAEESQRNFFQNASHELRTPLMSIQGYTEGVQEGIIDA-ELAHSVILQESKKMKQLVDDIILLSKLDSNLSDQKDEFSLNELLNSII--AYFKPLANKQKISITYRPDKHEKLLKGNEELIQRAINNILSNALRYAVSHIEISYTNQK----LTISNDGPAISKEDLPYIFDRFYKG-HGGQTGIGLAMTKEIIKQHHGNIIAESDSTSTTFTIYFNCHKIA |
4BIU Chain:A ((79-279)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SQQRLLSDISHELRTPLTRLQLGTALLRRRSGESKELER--IETEAQRLDSMINDLLVMSRNQQKNALVSETIKANQLWSEVLDNAAFEAEQMGKSLTVNFPPGPWP--LYGNPNALESALENIVRNALRYSHTKIEVGFAVDKDGITITVDDDGPGVSPEDREQIFRPFYRTD-----GLGLAIVETAIQQHRGWVKAEDSPLGGLRLVIWLPLYK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BIU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -54270 for 1181 contacts (-46.0/contact) +
2D Compatibility (PS) -19275 + (NN) -1361 + (LL) 20848
1D Compatibility (HY) -12000 + (ID) 2900
Total energy: -68958.0 ( -58.39 by residue)
QMean score : 0.380
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