Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEVKDILKTVDHTLLATTATWPEIQTILDDAMAYETASACIPASYVKKAAEYVSG-KLAICTVIGFPNGYSTTAAKVFECQDAIKNGADEIDMVINLTDVKNGDFDTVEEEIRQIKAACQDHILKVIVETCQLTKEELIELCGVVTRSGADFIKTSTGFSTAGATFEDVEVMAKY---VGEGVKIKAAGGISSLEDAEKFIALGASRLGTSRIIKIVK----NQKVEEGTY
3OA3 Chain:A ((54-274))
-EVVSIAQIIDHTQLSLSATGSQIDVLCAEAKEYGFATVCVRPDYVSRAVQYLQGTQVGVTCVIGFHEGTYSTDQKVSEAKRAMQNGASELDMVMNYPWLSEKRYTDVFQDIRAVRLAAKDAILKVILETSQLTADEIIAGCVLSSLAGADYVKTSTGFNGPGASIENVSLMSAVCDSLQSETRVKASGGIRTIEDCVKMVRAGAERLGASAGVKIVNETRL---------
General information:
TITO was launched using:
RESULT:
Template:
3OA3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -149636 for 1815 contacts (-82.4/contact) +
2D Compatibility (PS) -23647 + (NN) -7354 + (LL) 608
1D Compatibility (HY) -17600 + (ID) 4300
Total energy: -201929.0 ( -111.26 by residue)
QMean score : 0.509
(partial model without unconserved sides chains):
PDB file :
Tito_3OA3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OA3-query.scw
PDB file :
Tito_Scwrl_3OA3.pdb
: