Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MITKEQYFYFRQLDDFKHFTIEQFDHIVSHIKHRTALKNHTLFFEGDYREKLFLIQSGHVKIEQSDASGSFIYTDYVRQGTVFPYGGLF-LDDDYHFSAVAITDIEYFSLPMALYEEYSLQNINQMKHLCRKYSKLLRVHEIRLRNMVTSSASMRVIQSLATLLLQVPTERGH---LPFPITTIEIANMSGTTRETVSHVLKELRQKDIVEMKGKKLLYNNKNYFKKFIE
2OZ6 Chain:A ((3-202))
--------------------LKHLDKLLAHCHRRRYTAKSTIIYAGDRCETLFFIIKGSVTILIEDDDGREMIIGYLNSGDFFGELGLFE--QERSAWVRAKVECEVAEISYAKFRELSQQDSEILYTLGSQMADRLRKTTRKVGDLAFLDVTGRVARTLLDLCQQ-PDAMTHPDGMQIKITRQEIGRIVGCSREMVGRVLKSLEEQGLVHVKGKTMVVFGT--------
General information:
TITO was launched using:
RESULT:
Template:
2OZ6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -105407 for 1394 contacts (-75.6/contact) +
2D Compatibility (PS) -20716 + (NN) -6249 + (LL) 2364
1D Compatibility (HY) -12400 + (ID) 2650
Total energy: -145058.0 ( -104.06 by residue)
QMean score : 0.453
(partial model without unconserved sides chains):
PDB file :
Tito_2OZ6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OZ6-query.scw
PDB file :
Tito_Scwrl_2OZ6.pdb
: