Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEELLERVFSFSDVDKLIDFISYELQKPVILESADFFLLAYNSYYINHFDSANQQTIFSKKCPVQIFERFLKDGIIEKLKTEPEPFRVNKIESIGLNQRVVVSAKHKGEVMGYIWIQELDQNLTDEELDFLYETSFHVGKIIYKTNKLKQEKEEKAEDLIKRAIYQQFTSEKELRREAERINTVLPSMFSVVILHAANGDGEAVEDLKENIRSYLNLRDKVSHVLTIESNIVIVVASFSQKSSVSS----AASEFINKLLTHFHFQKIPTPIYIGIGNEYNHLLKLGKSYTEALEVIKAAEITGNQENIPYEYAKLGIYRYLESIEQKNEFLEYENKDLALLKAKDEESSTELLKTLEIYLLNNCKTKPAAEQLFIHQNTLNYRIKQITEMTSIDLSDFRTRCQLYLDLMLMKKK
1QU3 Chain:A ((789-843))---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EVDQALLDKWRTFMNLRDDVNRALETARNEKVIGKSLEAKVTIASNDKFNASEFL---------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1QU3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 68 -10872 -159.88 -213.18
target 2D structure prediction score : 0.39
Monomeric hydrophicity matching model chain A : 0.55

3D Compatibility (PKB) : -159.88
2D Compatibility (Sec. Struct. Predict.) : 0.39
1D Compatibility (Hydrophobicity) : 0.55
QMean score : 0.456

(partial model without unconserved sides chains):
PDB file : Tito_1QU3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1QU3-query.scw
PDB file : Tito_Scwrl_1QU3.pdb: