Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNDQSCVRIMTEWDIVAARQLGRNVAKELGFGTVDQ-ARITTAISELARNIYLYA----GKGQIGIEQVADRGKKGLKIIAEDQGPGIPDIRKVMEDGFSTSGGL---GAGLPGVKRLMDEFSLNSVAGEGTEIQAIKWLR
1THN Chain:A ((33-132))--------------------------------TMDELTEIKTVVSEAVTNAIIHGYNNDPNGIVSISVIIEDGVVHLTV--RDEGVGIPDIEEARQPLFTTKPELERSGMGFTIMENFMDEVIVESEVNKGTTV-------


General information:
TITO was launched using:
RESULT:

Template: 1THN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 321 -28817 -89.77 -313.22
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : -89.77
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.427

(partial model without unconserved sides chains):
PDB file : Tito_1THN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1THN-query.scw
PDB file : Tito_Scwrl_1THN.pdb: