Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPINSFENYPMSWKPSIDKAEKPIYKALAGQLEQDILNGVLLPGTKLPPQRELADYLDLNVSTISKAFKVCELKGLLSATVGSGTFVSYDALSNAYLLEDTKPTHLIEMGAILPDHASYEPLLYQLKNMVHEEDYEKWFSYGRAGESLWQKDAAVKLIQRGGFETSVDHILFANGGQNAIAATLASLCKPGDRIGVDHHTYPGLKTVASLLSVQIVPIKSENDEMSPESLE---YACKNENIKG--------LYLIPDYHNPTTSFMSVENRRMVADIVKKYNLFVIEDASYHLL--NKNPLPALASF-APQQVIHIASLSKSLAPGLRLAYVAVPRQYKEPI---------SKALYNLNITVSPLLAELTARTIVSNQFEVLIESHREQTIRRNQLVNRYVAGYTCLGV-ETGIFRWLLLPGKMSGAEF-EELAARLGVQVYAAERFVVGNSCPERAVRVSVCAPKTLEELEQGLMILRRLLDDLT
5EFS Chain:A ((114-423))----------------------------------------------------------------------------------------------------------------------------------------------------------------------------TSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKIISSGLRIGFLTGPKPLIERVILHIQVSTLHPSTFN-QLMISQLLHEWGEEGFMAH-VDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIKVKGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSS-ASPEQMDVAFQVLAQLIKE--


General information:
TITO was launched using:
RESULT:

Template: 5EFS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1354 -153788 -113.58 -539.61
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -113.58
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.492

(partial model without unconserved sides chains):
PDB file : Tito_5EFS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5EFS-query.scw
PDB file : Tito_Scwrl_5EFS.pdb: