Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLIRNPFKDKYYSHDRRALNMLALRVPGLAFILMIYIASIVLQFVSGGWSILLLYAFTILIAIFALLHWHSYRWVKKRVILYFAVQGLITFALANLMTGFFILVIIGLYAFLIGQIIGMADRRRTFLILYLLLLLVINSAYHLHKGEVLHFIVIAAPIMIVIITYAATFFAQVDEKIKAQLTLERLELAHQQVEQLTLQNERQRMARDLHDTLAQGLVSLNMQLDAIHVHLAKGNTERAKEIIQQSMKRVKSTIADARSAIDDLRS-KSEEIGV-LKERITSLMDHFIESTGMACLL-DYRLHQVLDVRTAENCYYIIGECMTNAAKHAEAKTIWISI---WDDEKGRLHLTVKDNGKGFDVEKGKKKRGHYGLLGIQERVRAINGQFNIKSTKLKGTQIEITVPIQGEMQDE
3EHH Chain:A ((16-214))---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NERIAELVKLEERQRMARDLVDTLGQKLSLMGLKSDLARKLIYKDPEQAAREL--------KSVQQTARTSLNEVRKIVSSMKGIRLKDELINIK-QILEAADIMFIYEEEKWPENISLLNENILSMCLKEAVTNVVKHSQAKTCRVDIQQLWKE----VVITVSDDGT-FKG--------H-GLLGMRERLEFANGSLHIDTE--NGTKLTMAIP--------


General information:
TITO was launched using:
RESULT:

Template: 3EHH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 670 -68921 -102.87 -372.54
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain A : 0.57

3D Compatibility (PKB) : -102.87
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.363

(partial model without unconserved sides chains):
PDB file : Tito_3EHH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3EHH-query.scw
PDB file : Tito_Scwrl_3EHH.pdb: