Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEDAGLLLIRIMIGVVFLFYGTQKLFGWFGGYGIKGTGQWFESIGVKPGNVAAALSGLGELVSGILFILGVFLPLGAAIITIIMLGAIVKVHGAKGFANGAGGFEYNLVLIAVSIGVALIGSGAYALHF
2AMN Chain:A ((4-23))--RVWPLVIRTVIAGYNLYRAI-----------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2AMN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 20 -4501 -225.05 -225.05
target 2D structure prediction score : 0.50
Monomeric hydrophicity matching model chain A : 0.41

3D Compatibility (PKB) : -225.05
2D Compatibility (Sec. Struct. Predict.) : 0.50
1D Compatibility (Hydrophobicity) : 0.41
QMean score : -0.083

(partial model without unconserved sides chains):
PDB file : Tito_2AMN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2AMN-query.scw
PDB file : Tito_Scwrl_2AMN.pdb: