Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNQKGRGLEILINEKQDGQWLFSVLKTALKASKPVIQDWMSHQQIKVNHESVLNNMIVKKGDRVFIDLQESEASSVIPEYGELDILFEDNHMLIINKPAGIATHPNEDGQTGTLANLIAYHYQINGETCKVRHVHRLDQDTSGAIVFAKHRLAHAILDQQLEKKTLKRTYTAIAEGKLRTKKGTINSPIGRDRSHPTRRR---VSPGGQTAVTHFKVMAS-NAKERLSLVELELETGRTHQIRVHLASLGHPLTGDSLYGGGSKL--------------LNRQALHANKVQAVHPITDELIVAEAPFPADMKNLCRTYFS
1PRZ Chain:A ((79-309))-----------------------------------------------------------------------------PQDIPLDIVYEDEDIIVINKPRDLVVHPGAGNPDGTVLNALLHYYPPIADVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVESLQRREITREYEAVAIGHM-TAGGTVDEPISR---HPTKRTHMAVHPMGKPAVTHYRIMEHFRVHTRL---RLRLETGRTHQIRVHMAHITHPLVGDPVYGGRPRPPKGASEAFISTLRKFDRQALHATMLRLYHPISGIEMEWHAPIPQDMVELI-----


General information:
TITO was launched using:
RESULT:

Template: 1PRZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1149 -89512 -77.90 -420.24
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.72

3D Compatibility (PKB) : -77.90
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.391

(partial model without unconserved sides chains):
PDB file : Tito_1PRZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1PRZ-query.scw
PDB file : Tito_Scwrl_1PRZ.pdb: