Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNEQETIQEKAILVGCQLPHITDEHFENSMEELASLTKTADGKVLTSVTQKRNRADAATYIGKGKVEELKALVEELEADLLIFNDELSPSQLKSLATAIEVK-MIDRTQLILDIFAKRARTREGKLQIELAQLQYALPRLTGQGINLSRQGGGIGARGPGETKLETDRRHIRNRIHEINTQLSTVIRHRSRYRERRKKNGVLQIALVGYTNAGKSTWFNRLTSADSYEEDLLFATLDPMTRKMVLP-SGYSVLLSDTVGFIQDLPTTLIAAFRSTLEEVKEADLILHLIDSSNEDYAGHE--KTVLRLLEELEADDIPMLTAYNKRDQKLPDFIPTAGRDHIMVSAKFEDDAAAFKEAIQRYLRQELLTSFEAHVPASEGKLLSRIKSETMVDRFYFNEENEQYDISGYVQEEQSIIGELKKYM
3KXL Chain:A ((14-304))------------------------------EEAIALVEGANYKV-TSIYKLPKSPNVKFYIQYDKLQQIK---NDEEISTLIIFEQLKPRHFINIRRELKGKEVLDKILLLLEIFALHAGSKEAKMQIELARLKYELP-IIKET------------------------------------------------------NNIPSIGIVGYTNSGKTSLFNSLTGL------------SP--KRYAIPINNRKIMLVDTVSFIRGIPPQIVDAFFVTLSEAKYSDALILVIDSTFSENLLIETLQSSFEILREIGVSGKPILVTLNKIDK------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3KXL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 956 -109633 -114.68 -496.08
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -114.68
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.475

(partial model without unconserved sides chains):
PDB file : Tito_3KXL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3KXL-query.scw
PDB file : Tito_Scwrl_3KXL.pdb: