Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMLSILFIFGLILGSFYYTAGCRIPLHLSIIAPRSSCPFCRRTLTPAELIPILSFLFQKGKCKSCGHRISFMYPAAELVTACLFAAAGIRFGISLELFPAVVFISLLIIVAVTDIHFMLIPNRILIFFLPFLAAARLISPLDSWYAGLLGAAAGFLFLAVIAAITHGGVGGGDIKLFAVIGFVLGVKMLAAAFFFSVLIGALYGAAAVLTGRLAKRQPLPFAPAIAAGSILAYLYGDSIISFYIKMALG
1VD4 Chain:A ((13-52))-------------------------------ASFKCPVCSSTFTDLEANQLFDPMTGTFRCTFCHTEVEED---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1VD4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 129 -8535 -66.16 -213.36
target 2D structure prediction score : 0.30
Monomeric hydrophicity matching model chain A : 0.36

3D Compatibility (PKB) : -66.16
2D Compatibility (Sec. Struct. Predict.) : 0.30
1D Compatibility (Hydrophobicity) : 0.36
QMean score : 0.514

(partial model without unconserved sides chains):
PDB file : Tito_1VD4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VD4-query.scw
PDB file : Tito_Scwrl_1VD4.pdb: