Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAKKEFKAESKRLLDMMINSIYTQKEIFLRELISNSSDAIDKIYYKALTDDALTFDKDSYYIKVAADKDARTLTISDTGIGMTKDELEQHLGTIAKSGSLAFKKENELKDGHDI--IGQFGVGFYAAFMVADVVTVISKALGSEEAYKWESAGADGYTIEPCE-KDSVGTDIILKIKENTEDDSYDEFLEEYRLKAIIKKYSDFIRYPIKMDTTINKPKEGSENEFEEVQEEQTVNSMVPIWRKNKSELTDEDYEKFYAEKHYGFDKPLTHVHISVDGAVRYNAILFVPENMPFDYYSKEYEKGLELYSNGVLIMNKCADLLPDHFSFVKGMVDSEDLSLNISREMLQHDRQLKLIAKNISKKIKSELQSLLKKDREKYETFYKSFGRQLKFGVYNDFGANKDQLKDLLLFYSSKE-KKLVSLDEYVSRMPEEQKFIYYATGDSYDRIEKLPQTEMVADKGYEILYFTEDIDEFAIKMLASYQEKEFKSVSSGDLGIDTDEDQKQSEEEESKYKDLFEEMKNILSDKVKNVRISKRLKSHPVCLAADGEV--TIEMEKILNAMPDSQNVKAEKVLEINPNHEVFQTLQ----DAFEQDKEKLSLYTNLLYNQALLIEGLPIQDPVEFTNNICKVMV
2CG9 Chain:A ((7-672))----EFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQLETEPDLFIRITPKPEQKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEA--LSAGADVSMIGQFGVGFYSLFLVADRVQVISKS-NDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRL--FLKDDQL-EYLEEKRIKEVIKRHSEFVAYPIQLVVTKEVEKE------EEVQEIEELNKTKPLWTRNPSDITQEEYNAFYKSISNDWEDPLYVKHFSVEGQLEFRAILFIPKRAPF--------NNIKLYVRRVFITDEAEDLIPEWLSFVKGVVDSEDLPLNLSREMLQQNKIMKVIRKNIVKKLIEAFNEI-AEDSEQFEKFYSAFSKNIKLGVHED-TQNRAALAKLLRYNSTKSVDELTSLTDYVTRMPEHQKNIYYITGESLKAVEKSPFLDALKAKNFEVLFLTDPIDEYAFTQLKEFEGKTLVDITKDFELEETDEEKAEREKEIKEYEPLTKALKEILGDQVEKVVVSYKLLDAPAAIRT-GQFGWSANMERIMKAQA--------KTFEISPKSPIIKELKKRVDEGGAQDKTVKDL-TKLLYETALLTSGFSLDEPTSFASRINRLI-


General information:
TITO was launched using:
RESULT:

Template: 2CG9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2737 53839 19.67 91.41
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain A : 0.81

3D Compatibility (PKB) : 19.67
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.439

(partial model without unconserved sides chains):
PDB file : Tito_2CG9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2CG9-query.scw
PDB file : Tito_Scwrl_2CG9.pdb: