Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTTPGKLNKARVPPYKTAGLGLVLVFALVVALVYLQFRGEFTPKTQLTMLSARAGLVMDPGSKVTYNGVEIGRVDTISEVTRDGESAAKFILDVDPRYIHLIPANVNADIKATTVFGGKYVSLTTPKNPTKRRITPKDVIDVRSVTTEINTLFQTLTSIAEKVDPVKLNLTLSAAAEALTGLGDKFGESIVNANTVLDDLNSRMPQSRHDIQQLAALGDVYADAAPDLFDFLDSSVTTARTINAQQAELDSALLAAAGFGNTTADVFDRGGPYLQRGVADLVPTATL-------LDTYSPELFCTIRNFYDADPLAKAASGGGNGYSLRTNSEILSGIGISLLSPLALATNGAAIGIGLVAGLIAPPLAVAANLAGALPGIVGGAPNPYTYPENLPRVNARGGPGGAPGCWQPITRDLWPAPYLVMDTGASLAPYNHMEVGSPYAVEYVWGRQVGDNTINP |
3MJ8 Chain:L ((59-147)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PDHFSGSNSGNMATLTISKAQAGDEADYYCQSWDGTN--WVFGSGTKVTV-GQPNAAPSVTLFPPSSEELKTNQATLVCMINGFYPAD---------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MJ8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9348 for 329 contacts (-28.4/contact) +
2D Compatibility (PS) -8144 + (NN) -2302 + (LL) 20160
1D Compatibility (HY) -1600 + (ID) 1250
Total energy: -2484.0 ( -7.55 by residue)
QMean score : 0.155
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