Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKAADSAESDAGADQTGPQVKAADSAESDAGELGEDACPEQALVERRPSRLRRGWLVGIAATLLALAGGLGAAGYFALRSHQESQSIAREDLAAIEAAKDCVAATQAPDAGAMSASMQKIIECGTGDFGAQASLYTSMLVEAYQAASVHVQVTDMRAAVERNNNDGSVDVLVALRVKVSNTDSDAHEVGYRLRVRMALDEGRYKIAKLDQVTK |
| 3PJX Chain:A ((313-355)) | -------------------------------EIGEEQLPEQAVLEQLTRRLRE---LGFSLSLQRFGGRFSMIGNLA---------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PJX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -7390 for 219 contacts (-33.7/contact) +
2D Compatibility (PS) -4713 + (NN) -531 + (LL) 12160
1D Compatibility (HY) -3600 + (ID) 800
Total energy: -4874.0 ( -22.26 by residue)
QMean score : -0.255
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