Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIGADVPRDSQRARVYAAEAFVRTLFDRVTAHGSP-TVEFFGTQLTLPPEGRFGSVASVQRYVD---DVLAL-----------PAVGQNWPTVSPVRVRARRAATAAHYENHGGTGTIAVPDRHTAGWAMRELVVLHEVAHHLCQVPPPHGPEFVATVCTLTELVMGPEVGHVFRVVYAQEGVR
3WIB Chain:A ((57-133))
----------------------RHIFRRLHGHGRLLAVDLIGYGQSSKPDIEY-TLENQQRYVDAWFDALDLRNVTLVLQDWGAAFGLNWASRNPDRVRA------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3WIB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10765 for 279 contacts (-38.6/contact) +
2D Compatibility (PS) -6062 + (NN) 1794 + (LL) 7856
1D Compatibility (HY) -3600 + (ID) 1250
Total energy: -12027.0 ( -43.11 by residue)
QMean score : 0.207
(partial model without unconserved sides chains):
PDB file :
Tito_3WIB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3WIB-query.scw
PDB file :
Tito_Scwrl_3WIB.pdb
: