Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKTGTATTRRRLLAVLIALALPGAAVALLAEPSATGASDPCAASEVARTVGSVAKSMGDYLDSHPETNQVMTAVLQQQVGPGSVASLKAHFEANPKVASDLHALSQPLTDLSTRCSLPISGLQAIGLMQAVQGARR
1BGV Chain:A ((7-65))
---------------------------VIAEVEKKYADEP----EFVQTVEEVLSSLGPVVDAHPEYEEV--ALLERMVIPERVIEFRVPWE--------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1BGV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5116 for 283 contacts (-18.1/contact) +
2D Compatibility (PS) -6021 + (NN) 268 + (LL) 6184
1D Compatibility (HY) -6000 + (ID) 1050
Total energy: -11735.0 ( -41.47 by residue)
QMean score : 0.520
(partial model without unconserved sides chains):
PDB file :
Tito_1BGV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BGV-query.scw
PDB file :
Tito_Scwrl_1BGV.pdb
: