Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDRKPVRGRHQARKRAVALLFEAEVRGISAAEVVDTRAALAEAKPDIARLHPYTAAVARGVSEHAAHIDDLITAHLRGWTLDRLPAVDRAILRVSVWELLHAADVPEPVVVDEAVQLAKELSTDDSPGFVNGVLGQVMLVTPQLRAAAQAVRGGA
1TZV Chain:A ((52-130))
-----------------------------------------------------------RGIKENLSMIDDLISRYLEKWSLNRLSVVDRNVLRLATYELLFEKDIPIEVTIDEAIEIAKRYGTENSGKFVNGILDRI------------------
General information:
TITO was launched using:
RESULT:
Template:
1TZV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49687 for 539 contacts (-92.2/contact) +
2D Compatibility (PS) -8228 + (NN) -1276 + (LL) 7056
1D Compatibility (HY) -9600 + (ID) 1800
Total energy: -63535.0 ( -117.88 by residue)
QMean score : 0.629
(partial model without unconserved sides chains):
PDB file :
Tito_1TZV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TZV-query.scw
PDB file :
Tito_Scwrl_1TZV.pdb
: