Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MATIHPPAYLLDQAKRRFTPSFNNFPGMSLVEHMLLNTKFPEKKLAEPPPGSGLKPVVGDAGLPILGHMIEMLRGGPDYLMFLYKTKGPVVFGDSAVLPGVAALGPDAAQVIYSNRNKDYSQQG-WVPVIGPFFHRGLMLLDFEEHMFHRRIMQEAFVRSRL-AGYLEQMDRVVSRVVAD---DWVVNDARFLVYPAMKALTLDIASMVFMGHEPGTD-HELVTKVNKAFTITTRAGNAVIRTSVPPFTWWRGLRARELLENYFTARVKERREASG--NDLLTVLCQTEDDDGNRFSDADIVNHMIFLMMAAHDTSTSTATTMAYQLAAHPEWQQRCR-DESDRHGDG--PLDIESLEQLESLDLVMNESIRLVTPVQWAMRQTVRDTELLGYYLPKGTNVIAYPGMNHRLPEIWTDPLTFDPERFTEPRNEHKRHRYAFTPFGGGVHKCIGMVFDQLEIKTILHRLLRRYRLELSRPDYQPRWDYSAMPIPMDGMPIVLRPR |
3JUS Chain:A ((20-439)) | --------------------------------------------------------------IPFLGHAIAFGKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRLTTPVFGKGVAY-DVPNPVF---LEQKKMLKSGLNIAHFKQHVSIIEKETKEYFESWGESGEKN-VFEALSELIILTASHCLHGKEIRSQLNEKVAQLYADLDGGFSHAAWLLPGWLPLPSFRRRDRAHREIKDIFYKAIQKRRQSQEKIDDILQTLLDATYKDGRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLPPLTYDQLKDLNLLDRCIKETLRLRPPIMIMMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQ-DNPASGEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLID-GYFPTVNYTTM-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3JUS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -206263 for 3258 contacts (-63.3/contact) +
2D Compatibility (PS) -43434 + (NN) -20682 + (LL) 3476
1D Compatibility (HY) -26400 + (ID) 5500
Total energy: -298803.0 ( -91.71 by residue)
QMean score : 0.381
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