Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMAASLSENLSCHSSNMCRLSGNAATNLERPGEEPPGDRCTRRQAVRPART--LAKKGNIPV-GYYKDEKKTAETFRTINGVRYAIPGDYAQVEEDGTVTMLGRGSVSINSGGEKVYPEEVEAALKGHPDVFDALVVGVPDPRYGQQVAAVVQARPGCRPSLAELDSFVRSE-IAGYKVPRSLWFVDEVKRSPAGKPDYRWAKEQTEARPADDVHAGHVTSGS
1MDB Chain:A ((373-519))--------------------------------------------VKPGETGHLLTRGPYTIRGYYKAEEHNAASF-TEDG--FYRTGDIVRLTRDGYIVVEGRAKDQINRGGEKVAAEEVENHLLAHPAVHDAAMVSMPDQFLGERSCVFIIPRDEA-PKAAELKAFLRERGLAAYKIPDRVEFVESFPQTGVGK---------------------------


General information:
TITO was launched using:
RESULT:

Template: 1MDB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -35815 for 886 contacts (-40.4/contact) +
2D Compatibility (PS) -16019 + (NN) -10812 + (LL) 3268
1D Compatibility (HY) -8800 + (ID) 2800
Total energy: -70978.0 ( -80.11 by residue)
QMean score : 0.440

(partial model without unconserved sides chains):
PDB file : Tito_1MDB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1MDB-query.scw
PDB file : Tito_Scwrl_1MDB.pdb: