Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRNLFALTPMALALCTASAAWADEGEAKEGFIEGSSLQLLTRNYYFNHDRRHASGHDSKE-WAQGFIATFQSGYTPGVVGFGVDAYGMLGLKLDGGGGTGGTSILPITSPSKEGYESGKAPDEFSSGGAALKIRAFDTELKLGDQFLSNPVVAGGESRMLPQTFRGVSLTNNSFEDLTLTAGQVSFTKYYNQSGHRRLG--SYYGELPGDRDSHHLSWLGGTWGGIEGFTSSLYAAELQNVWKQYYADVDYTYEIDDNWSLNPGA-----HYYKTVDSGDSLLGRIDNNTYSLHFAVGYRQHTVTAVLQKVNGNTPFDYINQGDSIFLDNSQQYSDFNGPNEKSWKLQYDYDFVALGLPGLSASASYSRGKLDLTRVDPDSPGYGGWYSADGKNAKHWERDLDLQYVVQGGPAKDLSLRLRWATHRGTGGYSAVDNDIDEYRVIVDYPIDVF |
| 2Y0L Chain:A ((13-402)) | -----------------------------GFLEDSKASLETRNFYMNRDFR------KREEWAQGFILNLQSGYTQGTVGFGLDAMGMLGVKLDS-------------------------PDTYSKLGLTAKVKVSQSELKVGTLIPKLPSVQPNNGRIFPQIFEGALLTSKEIKDLGFTAGRLEKTKI----DSEDLALNDKNGRFAG-VSADHFDLGGLDYKLTDQLTASYHYSNLQDVYRQHFVGLLHS------WPIGPGELTSDLRFARSTDSGSAKAGGIDNKSLNGMFTYSLGNHAFGAAWQRMNGDDAFPYL-EGSNPYLVNFVQVNDFAGPKERSWQLRYDYDFVGLGIPGLTFMTRYVKGD------NVELAGQ-G-------EGREWERNTELQYVFQSGALKNLGIRWRNATFR-----SNFTRDIDENRLIVSYTLPIW |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y0L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 4655 for 2734 contacts (1.7/contact) +
2D Compatibility (PS) -36947 + (NN) -8216 + (LL) 2744
1D Compatibility (HY) -25600 + (ID) 7200
Total energy: -70564.0 ( -25.81 by residue)
QMean score : 0.162
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