Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSIPRLPPLNAVRAFEAAARLGSYVAAAKALHVTQPAVGRHVRLLEDWLGARLFERTSRGVLLTPAGRQYYAAVSTALQQIAEAGGQLSGAR----WLRIMAVPAFSRRWLTSRLETLCAQRPGLKIALE-PNPTFDHVEERSADLGIVYG-LPGQYANPRALLIRPKVFPVCSPAYLAAAGP-------LESAEQLVAHKLIHVDDGEWWNLWFSAIGVDVEVRPAVLYLSNDHA--LARAEEGLGIALANEVLVRQELRSGALVRPLAAEAALE---CYQVLTPPGTPSADVEWFIGWLGEALREEFPDAVTS |
| 3MZ1 Chain:A ((85-287)) | --------------------------------------------------------------------------------------------LPKGRLRVETASAFANLVIIPALPEFHKKYPDIQIDLGVSDRT--YLAE-NVDCAIRAGTLTDQSLIARR--ITEMKFVACASRDFLERHPVPQHPSDLEKNCYVVGYFLPK----QQMPFHFRRGNEEIEVSGRYTMAANESTTYLAAARAGLGVIQAPLFMVREDLRNGTMV-PVLPDWQVEPMPIYLVYPPNRHLSSRLRVFADWVVKVMAQSQN----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MZ1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -120629 for 1296 contacts (-93.1/contact) +
2D Compatibility (PS) -19717 + (NN) -3656 + (LL) 8192
1D Compatibility (HY) -12000 + (ID) 2450
Total energy: -150260.0 ( -115.94 by residue)
QMean score : 0.266
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