Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFKSLHQYAHVFSRLSLFGLAFAAAAQAQSQSLTVISFGGATKAAQEQAYFKPFERSGGGQVVAGEYNGEMAKVKAMVDVGKVSWDVVEV--ESPELLRGCDEGLFERLDPARFGDPAQFV----PGTFS-ECGVATYVWSMVMAYDSTKLA--RAPQSWADFWNVREFPGKRGLRKGAKYTLEVALLADGVKAEDLYKVLATPEGVSRAFAKLDQLKPN-IQWWEAGAQPPQWLAAGDVVMSAAYNGRIAAAQKEGVKLAIVWPGSLYDPEYWAVVKGTPNKALAEKFIAFASQPQTQKVFSEQIPYGPVHKGTL-ALLPKTVQEALPTAPANLEGARAVDAEFWVDHGEELEQRFNAWAAR |
| 3RPW Chain:A ((31-340)) | ----------------------------QSNVVIMQDPGGGYGDALRKVMYDPFEKETGIKVVTVQEARSGPRIKAQAEAGKAQWDLTFIFDQETKLLGDC---CLADIDYSKLSESAHKTLAAMPDNLKRKKGVALQVIGVGLVYNKDKFKGDKAPQTWADFWDVKKFPGRRCMPAWPRFTFEAALMADGVTKDKLY-----PIDMDRALKKLKEIKPHVVKWWTTAAQPPQLILDGEADMCLAYTGSMSKLALEGAPIDLTFNQGFVYYDFFSIPKGAPNYDNALKLLSWRLDPKRAAQLTSTFPVALPSKVVFDAATDKNIARYWANNPENVAKAIEWSPDFWGAPSPAGNSTNEEYGQE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RPW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -97126 for 2531 contacts (-38.4/contact) +
2D Compatibility (PS) -32214 + (NN) -11302 + (LL) 3452
1D Compatibility (HY) -18800 + (ID) 4450
Total energy: -160440.0 ( -63.39 by residue)
QMean score : 0.421
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