Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSMRLKLLRKKLGVTLETLAEKTGLTKSYLSKVERGLNTPSIAAALKLAKALNVQVEELFSEESDGVDGYSIVRRDQRKSLSSGDDGPAYASLAQQIGARALLPFIVHPPRDFSHSTFKEHLGEEFIFVHEGQVEVDFMNQRIILERGDALHFNAQKPHRIRSLGETQAELLVVIHSDE
1Y7Y Chain:A ((17-73))
---RLRELRTAKGLSQETLAFLSGLDRSYVGGVERGQRNVSLVNILKLATALDIEPRELF-----------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1Y7Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23564 for 389 contacts (-60.6/contact) +
2D Compatibility (PS) -6413 + (NN) -5404 + (LL) 7872
1D Compatibility (HY) -4000 + (ID) 1350
Total energy: -32859.0 ( -84.47 by residue)
QMean score : 0.827
(partial model without unconserved sides chains):
PDB file :
Tito_1Y7Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Y7Y-query.scw
PDB file :
Tito_Scwrl_1Y7Y.pdb
: