Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSQFFQIHPENPQPRLVKQAVEIVRQGGVIVYPTDSSYALGCRIGEKTAVDRIRRIRQLDDKHNFTLVCRDLSELGVYAK-VDTGLFRLLKAHTPGPYTFILSATREVPRMLLHPKRRTIGLRVPNCPIARALLEELGEPLMSVSLIMPGSGEPLNDPYEMRQVLEHQVDLIVDGGYG-GGEASTVISLTDTDPEVIRVGCGDPAPFMQPA
2EQA Chain:A ((2-219))
-TQIIKIDPLNPEIDKIKIAADVIRNGGTVAFPTETVYGLGANAFDGNACLKIFQAKNRPVDNPLIVHIADFNQLFEVAKDIPDKVLEIAQIVWPGPLTFVLKKTERVPKE-VTAGLDTVAVRMPAHPIALQLIRESGVPIAAPSANLATRPSP-TKAEDVIVDLNGRVDVIIDGGHTFFGVESTIINVTVEP-VLLR-----PGPF----
General information:
TITO was launched using:
RESULT:
Template:
2EQA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -145659 for 1750 contacts (-83.2/contact) +
2D Compatibility (PS) -21909 + (NN) -18206 + (LL) 580
1D Compatibility (HY) -10800 + (ID) 2900
Total energy: -198894.0 ( -113.65 by residue)
QMean score : 0.689
(partial model without unconserved sides chains):
PDB file :
Tito_2EQA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2EQA-query.scw
PDB file :
Tito_Scwrl_2EQA.pdb
: