Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSLPAAPKVPPQVAEQAVRWLVELQGGADDERLRQAWQRWRQAAPEHEQAWRHIEAVNQRLAGIGTPLALAAINAPHSPQRRRALKTLLLVLAAGGSAWGLRESGSLQRWSADYATGVGERRRLALADGSRLELNSDTAVDVRFDAGERRLLLLRGEIQLSTGHDPRPLHVYSAEGRLRPVGTRFDVRQFAGRTRVAVHEGAVQVE--NRAGQGLLLPSGRQLDFDRERL---GAPQPLPVGSGAWTDGMLVAAGMRLDEFLAEVARYRPGRLGCDPRIGGLRISGSYPLDDSERILATLPAVLPVEVRRVTRYWVGVHPRE |
3LB8 Chain:A ((78-122)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTQVTAINRDRQQVILSDGRALDYDRLVLATGGRPRPLPVASGA----------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3LB8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 566 for 140 contacts (4.0/contact) +
2D Compatibility (PS) -4278 + (NN) -4149 + (LL) 19168
1D Compatibility (HY) -3200 + (ID) 1150
Total energy: 6957.0 ( 49.69 by residue)
QMean score : 0.367
|
|
|