Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGVNANISESLTGTIEAPFPEFEAPPANPMEVLRNWLERARRYGVREPRALALATVDGQGRPSTRIVVIAELGERGVVFATHADSQKGRELAQNPWASGVLYWRESSQQIILNGRAERLPDERADAQWLSRPYQTHPMSIASRQSETLADIHALRAEARRLAET--DGPLPRPPGYCLFELCLESVEFWGNGTERLHERLRYDRDEGGWKHRYLQP
1G79 Chain:A ((28-218))
-------------------------PADPLTLFERWLSQACEAKLADPTAMVVATVDEHGQPYQRIVLLKHYDEKGMVFYTNLGSRKAHQIENNPRVSLLFPWHTLERQVMVIGKAERLSTLEVMKYFHSRPRDSQIGAWVSKQSSRISARGILESKFLELKQKFQQGEVPLPSFWGGFRVSLEQIEFWQGGEHRLHDRFLYQRENDAWKIDRLAP
General information:
TITO was launched using:
RESULT:
Template:
1G79.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66462 for 1322 contacts (-50.3/contact) +
2D Compatibility (PS) -20713 + (NN) -10329 + (LL) 1220
1D Compatibility (HY) -12800 + (ID) 3100
Total energy: -112184.0 ( -84.86 by residue)
QMean score : 0.612
(partial model without unconserved sides chains):
PDB file :
Tito_1G79.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1G79-query.scw
PDB file :
Tito_Scwrl_1G79.pdb
: