Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEPIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGPALAATAIPTHELRYID-QSG--ATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEERDGRVLIGARDGHGKPQALGADVLVGADGIHSAVRA---HLHPDQRPLSHGGITMWRGVTEFDRFL---DGKTMIVANDEHWSRLVAYPISARHAAEGKSLVNWVCMVPSAAVGQLDNEADWNRDGRLEDVLPFFADWD---LGWFDIRDLLTRNQLILQYPMVDRDPLPHWGRGRITLLGDAAHLMYPMGANGASQAILDGIELAAALARNADVAAALREYEEARRPTANKIILANREREKEEWAAASRPKTEKSAALEAITGSYRNQVERPR |
| 3RP6 Chain:A ((27-366)) | -------IVIGAGIGGLSAAVALKQSGI-DCDVYEAVKEIK---AAISVWPNGVKCMAHLGMGDIMETFGGPLRRMAYRDFRSGENMTQFSLAPLIERTGSRP-CPVSRAELQREML----DYWGRDSVQFGKRVTRCEEDADGVTVWFTDG----SSASGDLLIAADGSHSALRPWVLGFTPQRR---YAGYVNWNGLVEIDEALAPGDQWTTFVGEGK---RVSLMPVSA-----GRFYFFFDVPLPAGLAE--------DRDTLRADLSRYFAGWAPPVQKLIAALDPQTTNRIEIH----DIEPFSRLVRGRVALLGDAGHSTTPDIGQGGCAAMEDAVVLGAVFRQTRDIAAALREYEAQRCDRVRDLVLKARKR---------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RP6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -177014 for 2730 contacts (-64.8/contact) +
2D Compatibility (PS) -35343 + (NN) -12590 + (LL) 4708
1D Compatibility (HY) -18000 + (ID) 5650
Total energy: -243889.0 ( -89.34 by residue)
QMean score : 0.476
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