Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNSDVIKGKW----KQLTGKIKERWGDLTDDDLQAADGHAEYLVGKLQERYGWSKERAEQEVRDFSDRL
4JPJ Chain:A ((104-146))
-HCDISRAKWDNTLKQIASKLREQFGDRTIIFKQSSGGDPEFVT-------------------------
General information:
TITO was launched using:
RESULT:
Template:
4JPJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1832 for 129 contacts (14.2/contact) +
2D Compatibility (PS) -3865 + (NN) 440 + (LL) 1908
1D Compatibility (HY) -1200 + (ID) 650
Total energy: -1535.0 ( -11.90 by residue)
QMean score : 0.121
(partial model without unconserved sides chains):
PDB file :
Tito_4JPJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4JPJ-query.scw
PDB file :
Tito_Scwrl_4JPJ.pdb
: