Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIEVRNLLKVFDTRGQVVRAVDDVSTRVARGEVLVVIGPSGSGKSTFLRCLNGLEEFDEGSVSIDGVDLADPRTDINAYRREVGMVFQHFNLFPHMTVLENLCLAQRVVRKRGKAEREAKARALLAKVGIGQKADEYPSRLSGGQQQRVAIARALCMDPKVMLFDEPTSALDPEMVGEVLDVMKTLAVEGMTMVCVTHEMGFAREVADRVLFFDHGKLLEDAPPAQFFDNPQDPRAQAFLRQVL
2OUK Chain:A ((24-263))
MIDVHQLKKSFGS----LEVLKGINVHIREGEVVVVIGPSGSGKSTFLRCLNLLEDFDEGEIIIDGINLKAKDTNLNKVREEVGMVFQRFNLFPHMTVLNNITLAPMKVRKWPREKAEAKAMELLDKVGLKDKAHAYPDSLSGGQAQRVAIARALAMEPKIMLFDEPTSALDPEMVGEVLSVMKQLANEGMTMVVVTHEMGFAREVGDRVLFMDGGYIIEEGKPEDLFDRPQHERTKAFLSKVF
General information:
TITO was launched using:
RESULT:
Template:
2OUK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -161890 for 1989 contacts (-81.4/contact) +
2D Compatibility (PS) -27060 + (NN) -18329 + (LL) 240
1D Compatibility (HY) -30000 + (ID) 7600
Total energy: -244639.0 ( -123.00 by residue)
QMean score : 0.616
(partial model without unconserved sides chains):
PDB file :
Tito_2OUK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OUK-query.scw
PDB file :
Tito_Scwrl_2OUK.pdb
: