Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALAKRIIPCLDVDNGRVVKGVKFENIRDAGDPVEIARRYDEQGADEITFLDITASVDGRDTTLHTVERMASQVFIPLTVGGGVRSVQDIRNLLNAGADKVSINTAAVFNPEFVGEAADRFGSQCIVVAIDAKKVSAPGEAPRWEIFTHGGRKPTGLDAVLWAKKMEDLGAGEILLTSMDQDGVKSGYDLGVTRAISEAVNVPVIASGGVGNLEHLAAGILEGKADAVLAASIFHFGEYTVPEAKAYLASRGIVVR
2A0N Chain:A ((14-261))
--LAKRIIACLDVKDGRVVKGTNFENLRDSGDPVELGKFYSEIGIDELVFLDITASVEKRKTMLELVEKVAEQIDIPFTVGGGIHDFETASELILRGADKVSINTAAVENPSLITQIAQTFGSQAVVVAIDAKRVDG-----EFMVFTYSGKKNTGILLRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTTLPIIASGGAGKMEHFLE-AFLAGADAALAASVFHFREIDVRELKEYLKKHGVNVR
General information:
TITO was launched using:
RESULT:
Template:
2A0N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -161831 for 2162 contacts (-74.9/contact) +
2D Compatibility (PS) -26942 + (NN) -8482 + (LL) -24
1D Compatibility (HY) -21600 + (ID) 6700
Total energy: -225579.0 ( -104.34 by residue)
QMean score : 0.686
(partial model without unconserved sides chains):
PDB file :
Tito_2A0N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2A0N-query.scw
PDB file :
Tito_Scwrl_2A0N.pdb
: