Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEAIAKYDFKATADDELSFKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYIEMKPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRSTSVSRNQQIFLRDIEQMPQQPTYVQALFDFDPQEDGELGFRRGDFIHVMDNSDPNWWKGACHGQTGMFPRNYVTPVNRNV
3OVE Chain:A ((2-102))
-----------------------------------------------------EMKPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRSTSVSRNQQIFLRDIEQV---------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3OVE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59929 for 685 contacts (-87.5/contact) +
2D Compatibility (PS) -10647 + (NN) -5249 + (LL) 5496
1D Compatibility (HY) -14000 + (ID) 5000
Total energy: -89329.0 ( -130.41 by residue)
QMean score : 0.329
(partial model without unconserved sides chains):
PDB file :
Tito_3OVE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OVE-query.scw
PDB file :
Tito_Scwrl_3OVE.pdb
: