Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
NLYQFKNMIHCTVPSRPWWHFADYGCYCGRGGKGTAVDDLDRCCQVHDNCYGEAEKLG-CWPYLTLYKYECSQGKLTCSGGNNKCEAAVCNCDLVAANCFAGAPYIDANYNVNLKERCQ
2WQ5 Chain:A ((1-119))
NLYQFKNMIKCTVPSRSWWDFADYGCYCGRGGSGTPVDDLDRCCQVHDNCYNEAEKISKCWPFFKTYSYKCSQGTLTCKGGNNACAASVCDCDRLAAICFAGAPYNDNNYNIDLKARCQ
General information:
TITO was launched using:
RESULT:
Template:
2WQ5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -71622 for 892 contacts (-80.3/contact) +
2D Compatibility (PS) -12757 + (NN) -6477 + (LL) 0
1D Compatibility (HY) -16000 + (ID) 4500
Total energy: -111356.0 ( -124.84 by residue)
QMean score : 0.437
(partial model without unconserved sides chains):
PDB file :
Tito_2WQ5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WQ5-query.scw
PDB file :
Tito_Scwrl_2WQ5.pdb
: