Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLSILVAHDLQRVIGFENQLPWHLPNDLKHVKKLSTGHTLVMGRKTFESIGKPLPNRRNVVLTSDTSFNVVGVDVIHSIEDIYQLPGHVFIFGGQILFEEMIDKVDDMYITVIEGKFRGDTFFPPYTFEDWEVASSVEGKLDEKNTIPHTFLHLIRKK
3SQY Chain:X ((2-158))
-TLSILVAHDLQRVIGFENQLPWHLPNDLKHVKKLSTGHTLVMGRKTFESIGKPLPNRRNVVLTSDTSFNVEGVDVIHSIEDIYQLPGHVFIFGGQTLFEEMIDKVDDMYITVIEGKFRGDTFFPPYTFEDWEVASSVEGKLDEKNTIPHTFLHLIRK-
General information:
TITO was launched using:
RESULT:
Template:
3SQY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -126336 for 1165 contacts (-108.4/contact) +
2D Compatibility (PS) -16380 + (NN) -3741 + (LL) 272
1D Compatibility (HY) -23200 + (ID) 7750
Total energy: -177135.0 ( -152.05 by residue)
QMean score : 0.559
(partial model without unconserved sides chains):
PDB file :
Tito_3SQY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3SQY-query.scw
PDB file :
Tito_Scwrl_3SQY.pdb
: