Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNVPHKSSLPEGIRPGTVLRIRGLVPPNASRFHVNLLCGEEQGSDAALHFNPRLDTSEVVFNSKEQGSWGREERGPGVPFQRGQPFEVLIIASDDGFKAVVGDAQYHHFRHRLPLARVRLVEVGGDVQLDSVRIF
2GAL Chain:A ((3-135))
---VPHKSSLPEGIRPGTVLRIRGLVPPNASRFHVNLLCGEEQGSDAALHFNPRLDTSEVVFNSKEQGSWGREERGPGVPFQRGQPFEVLIIASDDGFKAVVGDAQYHHFRHRLPLARVRLVEVGGDVQLDSVRIF
General information:
TITO was launched using:
RESULT:
Template:
2GAL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -84127 for 972 contacts (-86.6/contact) +
2D Compatibility (PS) -13983 + (NN) -5435 + (LL) 100
1D Compatibility (HY) -17200 + (ID) 6650
Total energy: -127295.0 ( -130.96 by residue)
QMean score : 0.673
(partial model without unconserved sides chains):
PDB file :
Tito_2GAL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GAL-query.scw
PDB file :
Tito_Scwrl_2GAL.pdb
: