Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MADEIAKAQVARPGGDTIFGKIIRKEIPAKIIFEDDRCLAFHDISPQAPTHFLVIPKKHISQISVAEDDDESLLGHLMIVGKKCAADLGLNKGYRMVVNEGSDGGQSVYHVHLHVLGGRQMHWPPG
4EQH Chain:B ((14-128))
-----------RPGGDTIFGKIIRKEIPAKIIFEDDRCLAFHDISPQAPTHFLVIPKKHISQISVAEDDDESLLGHLMIVGKKCAADLGLNKGYRMVVNEGSDGGQSVYHVHLHVLGGRQMHWPPG
General information:
TITO was launched using:
RESULT:
Template:
4EQH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -77011 for 817 contacts (-94.3/contact) +
2D Compatibility (PS) -12630 + (NN) -10334 + (LL) 1392
1D Compatibility (HY) -16000 + (ID) 5750
Total energy: -120333.0 ( -147.29 by residue)
QMean score : 0.441
(partial model without unconserved sides chains):
PDB file :
Tito_4EQH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4EQH-query.scw
PDB file :
Tito_Scwrl_4EQH.pdb
: