Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
IQLIPPLINLLMSIEPDVIYAGHDNTKPDTSSSLLTSLNQLGERQLLSVVKWSKSLPGFRNLHIDDQITLIQYSWMSLMVFGLGWRSYKHVSGQMLYFAPDLILNEQRMKESSFYSLCLTMWQIPQEFVKLQVSQEEFLCMKVLLLLNTIPLEGLRSQTQFEEMRSSYIRELIKAIGLRQKGVVSSSQRFYQLTKLLDNLHDLVKQLHLYCLNTFIQSRALSVEFPEMMSEVIAAQLPKILAGMVKPLLFHKK
3HQ5 Chain:A ((5-255))
-QLIPPLINLLMSIEPDVIYAGHDN---DTSSSLLTSLNQLGERQLLSVVKWSKSLPGFRNLHIDDQITLIQYSWMSLMVFGLGWRSYKHVSGQMLYFAPDLILNEQR-KESSFYSLCLTMWQIPQEFVKLQVSQEEFLCMKVLLLLNTIPLEGLRSQTQFEEMRSSYIRELIKAIGLR-KGVVSSSQRFYQLTKLLDNLHDLVKQLHLYCLNTFIQSRALSVEFPEMMSEVIAAQLPKILAGMVKPLLFHK-
General information:
TITO was launched using:
RESULT:
Template:
3HQ5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -183430 for 1911 contacts (-96.0/contact) +
2D Compatibility (PS) -25970 + (NN) -10297 + (LL) 572
1D Compatibility (HY) -43600 + (ID) 12300
Total energy: -275025.0 ( -143.92 by residue)
QMean score : 0.801
(partial model without unconserved sides chains):
PDB file :
Tito_3HQ5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HQ5-query.scw
PDB file :
Tito_Scwrl_3HQ5.pdb
: