Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAATASPQPLATEDADSENSSFYYYDYLDEVAFMLCRKDAVVSFGKVFLPVFYSLIFVLGLSGNLLLLMVLLRYVPRRRMV---EIYLLNLAISNLLFLVTLPFWGISVAWHWVFGSFLCKMVSTLYTINFYSGIFFISCMSLDKYLEIVHAQPYHRLRTRAKSLLLATIVWAVSLAVSIPDMVFVQTHENPKGVWNCHADFGGHGTIWKLFLRFQQNLLGFLLPLLAMIFFYSRIGCVLVRLRPAGQGRALKIAAALVVAFFVLWFPYNLTLFLHTLLDLQ-VFGNCEVSQHLDYALQVTESIAFLHCCFSPILYAFSSHRFRQYLKAFLAAVLGWHLAPGTAQASLSSCSESSILTAQEEMTGMNDLGERQSENYPNKEDVGNKSA |
| 4XT3 Chain:A ((48-315)) | ----------------------------------------------------YGVVFLFGSIGNFLVIFTI---TWRRRIQCSGDVYFINLAAADLLFVCTLPLWMQYLLDH---ASVPCTLLTACFYVAMFASLCFITEIALDRYYAIV----YMRYRPVKQACLFSIFWWIFAVIIAIPHFMVVTKKDN-----QCMTDYDYLEVSYPIILNVELMLGAFVIPLSVISYCYYRISRIVAVSQSRHKGRIVRVLIAVVLVFIIFWLPYHLTLFVDTLKLLKWISSSCEFERSLKRALILTESLAFCHCCLNPLLYVFVGTKFRQELHCLLAE------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XT3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -256928 for 1929 contacts (-133.2/contact) +
2D Compatibility (PS) -27253 + (NN) -14062 + (LL) 7344
1D Compatibility (HY) -39600 + (ID) 4350
Total energy: -334849.0 ( -173.59 by residue)
QMean score : 0.265
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